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Technological and Medical Implications of Metabolic Control Analysis » (New Edition)

Book cover image of Technological and Medical Implications of Metabolic Control Analysis by Athel Cornish-Bowden

Authors: Athel Cornish-Bowden (Editor), Maria Luz C rdenas
ISBN-13: 9780792361886, ISBN-10: 0792361881
Format: Hardcover
Publisher: Springer-Verlag New York, LLC
Date Published: January 2008
Edition: New Edition

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Author Biography: Athel Cornish-Bowden

Book Synopsis

The study of multienzyme systems has advanced considerably during the least decade. The cell is more complicated than classical biochemistry presents it, it contains more structure, and the behaviour of any system of enzymes is more elaborate than can be explained in simple terms. Nevertheless, classical enzymology and metabolism remain central to any modification of the metabolic behaviour of organisms, as attempted by modern biotechnology and drug development techniques.
In this cool, objective look at the current state of the art, internationally respected authors draw attention to the drawbacks, problems, and opportunities associated with this exciting field. The areas covered include problems with current practice, the imposition of human objectives on organisms, understanding health and disease, computer modelling, the increasingly complex picture of cell structure, control and regulation of metabolism, and the general contribution metabolic control is making to biochemistry on a broader canvas.

Booknews

Thirty-eight contributions from an international cast of biologists and biotechnologists attending an April 1999 NATO Advanced Research Workshop begin with discussion of problems with current practices in the field, including the fact that "real organisms vary widely, not only between species, but also between individuals, even in bacterial cultures..." (from the preface). Subsequent papers address current efforts to impose human objectives on organisms, the nature of health and disease, the use of metabolic models to predict the effects of drugs on particular enzymes, recent discoveries about cell structure, and the control and regulation of metabolism. A more specific sampling of topics: moiety conservation and flux enhancement, metabolic control analysis showing how aneuploidy causes cancer, regulation of energy metabolism in hepatocytes, computational approaches to the study of biochemical pathways, and an evolutionary view of glycogen structure. Annotation c. Book News, Inc., Portland, OR (booknews.com)

Table of Contents

I.Provoking an Argument: Problems with Current Approaches to the Analysis of Biochemical Systems
1.Snapshots of systems: metabolic control analysis and biotechnology in the post-genomic era3
2.Moiety conservation and flux enhancement27
3.On the universality of the universal method33
2.Imposing Discipline: Manipulation of Organisms for Technological Ends
4.Life is complicated41
5.Regulation and redirection of metabolism: incorporating regulatory information in flux calculation49
6.Recent development in metabolic pathway analysis and their potential implications for biotechnology and medicine57
7.Quantifying the importance of regulatory loops in homeostatic control mechanisms: hierarchical control of DNA supercoiling67
8.An integrated approach to the analysis of the control and regulation of cellular systems73
3.Understanding Health and Disease: Why Organisms Behave as they do
9.Mechanism of carcinogenesis by polycyclic aromatic hydrocarbons: aneuploidy precedes malignant transformation and occurs in all cancers83
10.Metabolic control analysis shows how aneuploidy causes cancer99
11.The control strength of glucokinase in hepatocytes: a predictor of metabolic defects in maturity onset diabetes of the young, type 2109
12.Metabolic distress associated with impaired control by alternative substrates: two examples taken from purine metabolism117
13.Regulation of ATP supply in muscle: implications for importance of flux control coefficients and for the genesis of mitochondrial myopathies125
14.Regulation of energy metabolism in hepatocytes131
15.Combined NMR experimental and computer-simulation study of 2,3-bisphosphoglycerate metabolism in human erythrocytes139
4.Taking Aim: Use of Metabolic Models to Identify Drug Targets
16.Computational approaches to the study of biochemical pathways and metabolic control149
17.Using metabolic control analysis to improve the selectivity and effectiveness of drugs against parasitic diseases157
18.Computer simulation as a tool for studying metabolism and drug design165
19.Use of metabolic control analysis to design a new strategy for cancer therapy173
5.Facing Reality: Not just a Bag of Enzymes
20.Implications of cytoarchitectural analysis183
21.Probing the cell interior with NMR spectroscopy191
22.Metabolite channelling and protein-protein interactions in the urea synthesis pathway199
23.Intracellular distribution of glycogen synthase: Another regulatory mechanism of glycogen metabolism?207
24.Supramolecular organization and substrate channelling in the mammalian translation system215
25.Analysis of co-localization of glycolytic enzymes in flight muscle and its relation to muscle function in Drosophila223
6.Thinking about Metabolism: The Relationship between Control and Regulation
26.Metabolic control from the back benches: biochemistry towards biocomplexity235
27.Physiological consequences of a non-regulated mutant phosphofructokinase in Escherichia coli243
28.Time-dependent or steady-state control of metabolic systems?251
29.Multisite modulation in the control of glycolysis: balance of supply and demand?259
30.Exercising control when control is distributed267
31.Metabolic control design: implications and applications275
32.Determining elasticities in situ283
33.Coordination and homeostasis in the response to multiple signals: role of metabolic cascades289
34.Putting the cart before the horse: designing a metabolic system in order to understand it299
35.Predicting the structural design of metabolic pathways: an evolutionary approach309
36.Glycogen structure: an evolutionary view319
7.Taking Stock: Control Analysis in the Context of Metabolic Regulation
37.From control to regulation: a new prospect for metabolic control analysis329
38.Metabolic control and metabolons in the millennium339
In memoriam: Paul Srere, 1925-1999347
Contributors351
Index355

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